From Hamburg Jungfernstieg train to Hamburg airport, fly to Copenhagen airport, then train to Malmö. 2hrs 44min $107. From Hamburg Hbf train to Koebenhavn H then train to Malmö Central. 5hrs 31min $75. From Hamburg central bus station bus to Malmö central train station. 7hrs 17min $34. From Hamburg drive to Malmö. 5hrs 00min $96.